WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10i.1 Sequence Name  ZK1098.10i.1
Length (nt)  2600   Chromosome Location  III: 9546295-9552508
Chromosome . Primary Identifier  III Chromosome Location . Start  9546295
Chromosome Location . End  9552508 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10i ZK1098.10i 1674   III: 9546359-9546424

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10i.1 9546295 9552508 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100714   130   III: 9546295-9546424 Caenorhabditis elegans
Exon100728   129   III: 9546671-9546799 Caenorhabditis elegans
Exon100739   280   III: 9547380-9547659 Caenorhabditis elegans
Exon100750   181   III: 9547751-9547931 Caenorhabditis elegans
Exon100762   122   III: 9548566-9548687 Caenorhabditis elegans
Exon100776   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100789   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100803   99   III: 9550137-9550235 Caenorhabditis elegans
Exon100825   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100840   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100855   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100867   881   III: 9551628-9552508 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10i.1 9546295 9552508 1

1 Sequence

Length
2600

1 Sequence Ontology Term

Identifier Name Description
transcript