WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10d.1 Sequence Name  ZK1098.10d.1
Length (nt)  4020   Chromosome Location  III: 9546295-9556514
Chromosome . Primary Identifier  III Chromosome Location . Start  9546295
Chromosome Location . End  9556514 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10d ZK1098.10d 3558   III: 9546359-9546424

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10d.1 9546295 9556514 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100749   130   III: 9546295-9546424 Caenorhabditis elegans
Exon100758   129   III: 9546671-9546799 Caenorhabditis elegans
Exon100769   280   III: 9547380-9547659 Caenorhabditis elegans
Exon100780   181   III: 9547751-9547931 Caenorhabditis elegans
Exon100792   122   III: 9548566-9548687 Caenorhabditis elegans
Exon100805   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100818   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100853   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100868   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100883   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100905   331   III: 9552582-9552912 Caenorhabditis elegans
Exon100916   400   III: 9553226-9553625 Caenorhabditis elegans
Exon100926   48   III: 9553676-9553723 Caenorhabditis elegans
Exon100932   84   III: 9554098-9554181 Caenorhabditis elegans
Exon100938   148   III: 9554443-9554590 Caenorhabditis elegans
Exon100948   81   III: 9554638-9554718 Caenorhabditis elegans
Exon100958   68   III: 9554769-9554836 Caenorhabditis elegans
Exon100968   149   III: 9555122-9555270 Caenorhabditis elegans
Exon100978   286   III: 9555328-9555613 Caenorhabditis elegans
Exon100988   300   III: 9555664-9555963 Caenorhabditis elegans
Exon101000   505   III: 9556010-9556514 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10d.1 9546295 9556514 1

1 Sequence

Length
4020

1 Sequence Ontology Term

Identifier Name Description
transcript