WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10a.2 Sequence Name  ZK1098.10a.2
Length (nt)  4898   Chromosome Location  III: 9546569-9557450
Chromosome . Primary Identifier  III Chromosome Location . Start  9546569
Chromosome Location . End  9557450 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10a ZK1098.10a 3420   III: 9546713-9546799

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10a.2 9546569 9557450 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100722   231   III: 9546569-9546799 Caenorhabditis elegans
Exon100734   280   III: 9547380-9547659 Caenorhabditis elegans
Exon100745   181   III: 9547751-9547931 Caenorhabditis elegans
Exon100757   122   III: 9548566-9548687 Caenorhabditis elegans
Exon100770   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100783   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100796   36   III: 9549647-9549682 Caenorhabditis elegans
Exon100810   18   III: 9550366-9550383 Caenorhabditis elegans
Exon100818   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100833   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100848   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100870   331   III: 9552582-9552912 Caenorhabditis elegans
Exon100880   400   III: 9553226-9553625 Caenorhabditis elegans
Exon100890   48   III: 9553676-9553723 Caenorhabditis elegans
Exon100902   148   III: 9554443-9554590 Caenorhabditis elegans
Exon100912   81   III: 9554638-9554718 Caenorhabditis elegans
Exon100922   68   III: 9554769-9554836 Caenorhabditis elegans
Exon100932   149   III: 9555122-9555270 Caenorhabditis elegans
Exon100942   286   III: 9555328-9555613 Caenorhabditis elegans
Exon100952   300   III: 9555664-9555963 Caenorhabditis elegans
Exon100970   1441   III: 9556010-9557450 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10a.2 9546569 9557450 1

1 Sequence

Length
4898

1 Sequence Ontology Term

Identifier Name Description
transcript