WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10m.1 Sequence Name  ZK1098.10m.1
Length (nt)  1785   Chromosome Location  III: 9546359-9551646
Chromosome . Primary Identifier  III Chromosome Location . Start  9546359
Chromosome Location . End  9551646 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10m ZK1098.10m 1785   III: 9546359-9546424

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10m.1 9546359 9551646 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100752   66   III: 9546359-9546424 Caenorhabditis elegans
Exon100763   129   III: 9546671-9546799 Caenorhabditis elegans
Exon100775   280   III: 9547380-9547659 Caenorhabditis elegans
Exon100786   181   III: 9547751-9547931 Caenorhabditis elegans
Exon100788   57   III: 9547997-9548053 Caenorhabditis elegans
Exon100798   122   III: 9548566-9548687 Caenorhabditis elegans
Exon100813   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100826   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100833   36   III: 9549647-9549682 Caenorhabditis elegans
Exon100839   99   III: 9550137-9550235 Caenorhabditis elegans
Exon100847   18   III: 9550366-9550383 Caenorhabditis elegans
Exon100862   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100877   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100892   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100898   19   III: 9551628-9551646 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10m.1 9546359 9551646 1

1 Sequence

Length
1785

1 Sequence Ontology Term

Identifier Name Description
transcript