WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10h.1 Sequence Name  ZK1098.10h.1
Length (nt)  2487   Chromosome Location  III: 9546359-9552540
Chromosome . Primary Identifier  III Chromosome Location . Start  9546359
Chromosome Location . End  9552540 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10h ZK1098.10h 1593   III: 9546359-9546424

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10h.1 9546359 9552540 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100754   66   III: 9546359-9546424 Caenorhabditis elegans
Exon100760   129   III: 9546671-9546799 Caenorhabditis elegans
Exon100771   280   III: 9547380-9547659 Caenorhabditis elegans
Exon100782   181   III: 9547751-9547931 Caenorhabditis elegans
Exon100794   122   III: 9548566-9548687 Caenorhabditis elegans
Exon100808   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100821   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100844   18   III: 9550366-9550383 Caenorhabditis elegans
Exon100857   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100872   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100887   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100901   913   III: 9551628-9552540 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10h.1 9546359 9552540 1

1 Sequence

Length
2487

1 Sequence Ontology Term

Identifier Name Description
transcript