WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10k.1 Sequence Name  ZK1098.10k.1
Length (nt)  981   Chromosome Location  III: 9548791-9551646
Chromosome . Primary Identifier  III Chromosome Location . Start  9548791
Chromosome Location . End  9551646 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10k ZK1098.10k 981   III: 9548791-9548821

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10k.1 9548791 9551646 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100767   31   III: 9548791-9548821 Caenorhabditis elegans
Exon100778   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100791   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100798   36   III: 9549647-9549682 Caenorhabditis elegans
Exon100805   99   III: 9550137-9550235 Caenorhabditis elegans
Exon100813   18   III: 9550366-9550383 Caenorhabditis elegans
Exon100827   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100842   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100857   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100863   19   III: 9551628-9551646 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10k.1 9548791 9551646 1

1 Sequence

Length
981

1 Sequence Ontology Term

Identifier Name Description
transcript