WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10j.1 Sequence Name  ZK1098.10j.1
Length (nt)  1620   Chromosome Location  III: 9546713-9551646
Chromosome . Primary Identifier  III Chromosome Location . Start  9546713
Chromosome Location . End  9551646 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10j ZK1098.10j 1620   III: 9546713-9546799

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10j.1 9546713 9551646 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100765   87   III: 9546713-9546799 Caenorhabditis elegans
Exon100773   280   III: 9547380-9547659 Caenorhabditis elegans
Exon100784   181   III: 9547751-9547931 Caenorhabditis elegans
Exon100796   122   III: 9548566-9548687 Caenorhabditis elegans
Exon100810   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100823   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100830   36   III: 9549647-9549682 Caenorhabditis elegans
Exon100837   99   III: 9550137-9550235 Caenorhabditis elegans
Exon100845   18   III: 9550366-9550383 Caenorhabditis elegans
Exon100859   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100874   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100889   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100895   19   III: 9551628-9551646 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10j.1 9546713 9551646 1

1 Sequence

Length
1620

1 Sequence Ontology Term

Identifier Name Description
transcript