WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10g.1 Sequence Name  ZK1098.10g.1
Length (nt)  2523   Chromosome Location  III: 9550196-9556116
Chromosome . Primary Identifier  III Chromosome Location . Start  9550196
Chromosome Location . End  9556116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10g ZK1098.10g 2523   III: 9550196-9550235

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10g.1 9550196 9556116 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100807   40   III: 9550196-9550235 Caenorhabditis elegans
Exon100823   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100838   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100853   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100875   331   III: 9552582-9552912 Caenorhabditis elegans
Exon100886   400   III: 9553226-9553625 Caenorhabditis elegans
Exon100896   48   III: 9553676-9553723 Caenorhabditis elegans
Exon100908   148   III: 9554443-9554590 Caenorhabditis elegans
Exon100918   81   III: 9554638-9554718 Caenorhabditis elegans
Exon100928   68   III: 9554769-9554836 Caenorhabditis elegans
Exon100938   149   III: 9555122-9555270 Caenorhabditis elegans
Exon100948   286   III: 9555328-9555613 Caenorhabditis elegans
Exon100958   300   III: 9555664-9555963 Caenorhabditis elegans
Exon100963   107   III: 9556010-9556116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10g.1 9550196 9556116 1

1 Sequence

Length
2523

1 Sequence Ontology Term

Identifier Name Description
transcript