WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10o.1 Sequence Name  ZK1098.10o.1
Length (nt)  2541   Chromosome Location  III: 9550196-9556116
Chromosome . Primary Identifier  III Chromosome Location . Start  9550196
Chromosome Location . End  9556116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10o ZK1098.10o 2541   III: 9550196-9550235

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10o.1 9550196 9556116 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100808   40   III: 9550196-9550235 Caenorhabditis elegans
Exon100816   18   III: 9550366-9550383 Caenorhabditis elegans
Exon100831   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100846   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100861   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100876   331   III: 9552582-9552912 Caenorhabditis elegans
Exon100887   400   III: 9553226-9553625 Caenorhabditis elegans
Exon100897   48   III: 9553676-9553723 Caenorhabditis elegans
Exon100909   148   III: 9554443-9554590 Caenorhabditis elegans
Exon100919   81   III: 9554638-9554718 Caenorhabditis elegans
Exon100929   68   III: 9554769-9554836 Caenorhabditis elegans
Exon100939   149   III: 9555122-9555270 Caenorhabditis elegans
Exon100949   286   III: 9555328-9555613 Caenorhabditis elegans
Exon100959   300   III: 9555664-9555963 Caenorhabditis elegans
Exon100964   107   III: 9556010-9556116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10o.1 9550196 9556116 1

1 Sequence

Length
2541

1 Sequence Ontology Term

Identifier Name Description
transcript