WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10p.1 Sequence Name  ZK1098.10p.1
Length (nt)  1725   Chromosome Location  III: 9552859-9556116
Chromosome . Primary Identifier  III Chromosome Location . Start  9552859
Chromosome Location . End  9556116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10p.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10p ZK1098.10p 1725   III: 9552859-9552912

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10p.1 9552859 9556116 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100878   54   III: 9552859-9552912 Caenorhabditis elegans
Exon100888   400   III: 9553226-9553625 Caenorhabditis elegans
Exon100898   48   III: 9553676-9553723 Caenorhabditis elegans
Exon100900   84   III: 9554098-9554181 Caenorhabditis elegans
Exon100910   148   III: 9554443-9554590 Caenorhabditis elegans
Exon100920   81   III: 9554638-9554718 Caenorhabditis elegans
Exon100930   68   III: 9554769-9554836 Caenorhabditis elegans
Exon100940   149   III: 9555122-9555270 Caenorhabditis elegans
Exon100950   286   III: 9555328-9555613 Caenorhabditis elegans
Exon100960   300   III: 9555664-9555963 Caenorhabditis elegans
Exon100965   107   III: 9556010-9556116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10p.1 9552859 9556116 1

1 Sequence

Length
1725

1 Sequence Ontology Term

Identifier Name Description
transcript