WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B4.6.1 Sequence Name  C48B4.6.1
Length (nt)  655   Chromosome Location  III: 9557448-9558563
Chromosome . Primary Identifier  III Chromosome Location . Start  9557448
Chromosome Location . End  9558563 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008169 C48B4.6 C48B4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B4.6 C48B4.6 531   III: 9557561-9557706

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.6.1 9557448 9558563 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100973   259   III: 9557448-9557706 Caenorhabditis elegans
Exon100974   81   III: 9557752-9557832 Caenorhabditis elegans
Exon100975   133   III: 9557880-9558012 Caenorhabditis elegans
Exon100976   182   III: 9558382-9558563 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.6.1 9557448 9558563 -1

1 Sequence

Length
655

1 Sequence Ontology Term

Identifier Name Description
transcript