WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B4.7.1 Sequence Name  C48B4.7.1
Length (nt)  620   Chromosome Location  III: 9558669-9559431
Chromosome . Primary Identifier  III Chromosome Location . Start  9558669
Chromosome Location . End  9559431 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B4.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008170 C48B4.7 C48B4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B4.7 C48B4.7 480   III: 9558805-9558896

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.7.1 9558669 9559431 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100977   228   III: 9558669-9558896 Caenorhabditis elegans
Exon100978   75   III: 9558948-9559022 Caenorhabditis elegans
Exon100979   136   III: 9559072-9559207 Caenorhabditis elegans
Exon100980   181   III: 9559251-9559431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.7.1 9558669 9559431 -1

1 Sequence

Length
620

1 Sequence Ontology Term

Identifier Name Description
transcript