WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B4.9.1 Sequence Name  C48B4.9.1
Length (nt)  769   Chromosome Location  III: 9562331-9563335
Chromosome . Primary Identifier  III Chromosome Location . Start  9562331
Chromosome Location . End  9563335 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B4.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008172 C48B4.9 C48B4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B4.9 C48B4.9 549   III: 9562537-9562682

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.9.1 9562331 9563335 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100993   352   III: 9562331-9562682 Caenorhabditis elegans
Exon100995   96   III: 9562731-9562826 Caenorhabditis elegans
Exon100997   136   III: 9562873-9563008 Caenorhabditis elegans
Exon101000   185   III: 9563151-9563335 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.9.1 9562331 9563335 -1

1 Sequence

Length
769

1 Sequence Ontology Term

Identifier Name Description
transcript