WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48B4.1 Sequence Name  C48B4.1
Length (nt)  1980   Chromosome Location  III: 9586713-9586838
Chromosome . Primary Identifier  III Chromosome Location . Start  9586713
Chromosome Location . End  9586838
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B4.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00491 ACOX-1.5 74.7 659 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00042707
WBRNAi00012089
WBRNAi00006132
WBRNAi00029928
WBRNAi00092601
WBRNAi00102608

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48B4.1 9586713 9586838 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008167 acox-1.5 C48B4.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48B4.1 9586713 9586838 -1
CDS:C48B4.1 9586890 9587171 -1
CDS:C48B4.1 9587623 9587765 -1
CDS:C48B4.1 9588109 9588267 -1
CDS:C48B4.1 9588705 9589414 -1
CDS:C48B4.1 9589721 9589814 -1
CDS:C48B4.1 9590548 9590617 -1
CDS:C48B4.1 9590727 9590891 -1
CDS:C48B4.1 9591347 9591512 -1
CDS:C48B4.1 9592119 9592183 -1

1 Sequence

Length
1980

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48B4.1.1 C48B4.1.1 2084   III: 9586618-9592192