WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A4.2.1 Sequence Name  F58A4.2.1
Length (nt)  558   Chromosome Location  III: 9600038-9600745
Chromosome . Primary Identifier  III Chromosome Location . Start  9600038
Chromosome Location . End  9600745 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010227 F58A4.2 F58A4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A4.2 F58A4.2 480   III: 9600115-9600214

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.2.1 9600038 9600745 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101120   177   III: 9600038-9600214 Caenorhabditis elegans
Exon101121   88   III: 9600262-9600349 Caenorhabditis elegans
Exon101122   124   III: 9600402-9600525 Caenorhabditis elegans
Exon101123   169   III: 9600577-9600745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.2.1 9600038 9600745 -1

1 Sequence

Length
558

1 Sequence Ontology Term

Identifier Name Description
transcript