WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A4.5.1 Sequence Name  F58A4.5.1
Length (nt)  2767   Chromosome Location  III: 9603003-9608750
Chromosome . Primary Identifier  III Chromosome Location . Start  9603003
Chromosome Location . End  9608750 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010228 clec-161 F58A4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A4.5 F58A4.5 2589   III: 9603118-9603167

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.5.1 9603003 9608750 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101129   165   III: 9603003-9603167 Caenorhabditis elegans
Exon101130   112   III: 9603221-9603332 Caenorhabditis elegans
Exon101131   261   III: 9603514-9603774 Caenorhabditis elegans
Exon101133   86   III: 9605596-9605681 Caenorhabditis elegans
Exon101134   115   III: 9605726-9605840 Caenorhabditis elegans
Exon101135   155   III: 9605933-9606087 Caenorhabditis elegans
Exon101137   1254   III: 9606349-9607602 Caenorhabditis elegans
Exon101139   72   III: 9607652-9607723 Caenorhabditis elegans
Exon101141   237   III: 9607851-9608087 Caenorhabditis elegans
Exon101143   125   III: 9608137-9608261 Caenorhabditis elegans
Exon101144   185   III: 9608566-9608750 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.5.1 9603003 9608750 -1

1 Sequence

Length
2767

1 Sequence Ontology Term

Identifier Name Description
transcript