WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A4.4b.1 Sequence Name  F58A4.4b.1
Length (nt)  417   Chromosome Location  III: 9612284-9613126
Chromosome . Primary Identifier  III Chromosome Location . Start  9612284
Chromosome Location . End  9613126 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A4.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004180 pri-1 F58A4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A4.4b F58A4.4b 354   III: 9612347-9612500

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.4b.1 9612284 9613126 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101162   217   III: 9612284-9612500 Caenorhabditis elegans
Exon101164   118   III: 9612548-9612665 Caenorhabditis elegans
Exon101165   82   III: 9613045-9613126 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.4b.1 9612284 9613126 -1

1 Sequence

Length
417

1 Sequence Ontology Term

Identifier Name Description
transcript