WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F58A4.4a Sequence Name  F58A4.4a
Length (nt)  1233   Chromosome Location  III: 9612347-9612500
Chromosome . Primary Identifier  III Chromosome Location . Start  9612347
Chromosome Location . End  9612500
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A4.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00220 PRI-1, isoform a 48.1 410 Caenorhabditis elegans
 

Other

31 RNAi

WormBase ID
WBRNAi00048931
WBRNAi00048930
WBRNAi00072549
WBRNAi00072550
WBRNAi00074467
WBRNAi00074469
WBRNAi00074471
WBRNAi00074470
WBRNAi00074473
WBRNAi00074472
WBRNAi00099854
WBRNAi00100433
WBRNAi00072548
WBRNAi00074468
WBRNAi00093051
WBRNAi00114562
WBRNAi00100807
WBRNAi00099248
WBRNAi00099652
WBRNAi00099450
WBRNAi00033061
WBRNAi00002693
WBRNAi00002715
WBRNAi00008139
WBRNAi00025744
WBRNAi00106643
WBRNAi00100059
WBRNAi00100246
WBRNAi00100620
WBRNAi00100994

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F58A4.4a 9612347 9612500 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004180 pri-1 F58A4.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F58A4.4a 9612347 9612500 -1
CDS:F58A4.4a 9612548 9612665 -1
CDS:F58A4.4a 9613045 9613129 -1
CDS:F58A4.4a 9613182 9613487 -1
CDS:F58A4.4a 9613536 9613746 -1
CDS:F58A4.4a 9613875 9614133 -1
CDS:F58A4.4a 9614180 9614279 -1

1 Sequence

Length
1233

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F58A4.4a.1 F58A4.4a.1 1328   III: 9612254-9614281