WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A4.8.1 Sequence Name  F58A4.8.1
Length (nt)  1476   Chromosome Location  III: 9626536-9629154
Chromosome . Primary Identifier  III Chromosome Location . Start  9626536
Chromosome Location . End  9629154 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A4.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006540 tbg-1 F58A4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A4.8 F58A4.8 1335   III: 9626677-9626991

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.8.1 9626536 9629154 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101241   456   III: 9626536-9626991 Caenorhabditis elegans
Exon101242   206   III: 9627547-9627752 Caenorhabditis elegans
Exon101243   210   III: 9627807-9628016 Caenorhabditis elegans
Exon101244   263   III: 9628216-9628478 Caenorhabditis elegans
Exon101245   237   III: 9628527-9628763 Caenorhabditis elegans
Exon101246   104   III: 9629051-9629154 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.8.1 9626536 9629154 -1

1 Sequence

Length
1476

1 Sequence Ontology Term

Identifier Name Description
transcript