WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A4.10.1 Sequence Name  F58A4.10.1
Length (nt)  877   Chromosome Location  III: 9630097-9631167
Chromosome . Primary Identifier  III Chromosome Location . Start  9630097
Chromosome Location . End  9631167 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A4.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006704 ubc-7 F58A4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A4.10 F58A4.10 495   III: 9630475-9630549

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.10.1 9630097 9631167 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101250   453   III: 9630097-9630549 Caenorhabditis elegans
Exon101251   179   III: 9630597-9630775 Caenorhabditis elegans
Exon101252   98   III: 9630823-9630920 Caenorhabditis elegans
Exon101253   103   III: 9630966-9631068 Caenorhabditis elegans
Exon101254   44   III: 9631124-9631167 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.10.1 9630097 9631167 -1

1 Sequence

Length
877

1 Sequence Ontology Term

Identifier Name Description
transcript