WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A4.11.1 Sequence Name  F58A4.11.1
Length (nt)  2957   Chromosome Location  III: 9631994-9637116
Chromosome . Primary Identifier  III Chromosome Location . Start  9631994
Chromosome Location . End  9637116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A4.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001570 gei-13 F58A4.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A4.11 F58A4.11 2076   III: 9632856-9632982

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.11.1 9631994 9637116 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101255   989   III: 9631994-9632982 Caenorhabditis elegans
Exon101256   188   III: 9633345-9633532 Caenorhabditis elegans
Exon101257   94   III: 9633585-9633678 Caenorhabditis elegans
Exon101258   350   III: 9633735-9634084 Caenorhabditis elegans
Exon101259   176   III: 9634134-9634309 Caenorhabditis elegans
Exon101260   282   III: 9634701-9634982 Caenorhabditis elegans
Exon101261   136   III: 9635429-9635564 Caenorhabditis elegans
Exon101262   246   III: 9635635-9635880 Caenorhabditis elegans
Exon101263   137   III: 9636076-9636212 Caenorhabditis elegans
Exon101264   359   III: 9636758-9637116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A4.11.1 9631994 9637116 -1

1 Sequence

Length
2957

1 Sequence Ontology Term

Identifier Name Description
transcript