WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07A9.7b.1 Sequence Name  C07A9.7b.1
Length (nt)  1650   Chromosome Location  III: 9691028-9694574
Chromosome . Primary Identifier  III Chromosome Location . Start  9691028
Chromosome Location . End  9694574 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A9.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007403 set-3 C07A9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07A9.7b C07A9.7b 1374   III: 9691301-9691365

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07A9.7b.1 9691028 9694574 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101318   338   III: 9691028-9691365 Caenorhabditis elegans
Exon101320   174   III: 9691664-9691837 Caenorhabditis elegans
Exon101323   304   III: 9691902-9692205 Caenorhabditis elegans
Exon101325   109   III: 9692714-9692822 Caenorhabditis elegans
Exon101327   84   III: 9692872-9692955 Caenorhabditis elegans
Exon101329   128   III: 9693006-9693133 Caenorhabditis elegans
Exon101331   146   III: 9693183-9693328 Caenorhabditis elegans
Exon101333   149   III: 9693533-9693681 Caenorhabditis elegans
Exon101335   218   III: 9694357-9694574 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07A9.7b.1 9691028 9694574 -1

1 Sequence

Length
1650

1 Sequence Ontology Term

Identifier Name Description
transcript