WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07A9.3b.1 Sequence Name  C07A9.3b.1
Length (nt)  3295   Chromosome Location  III: 9699994-9710268
Chromosome . Primary Identifier  III Chromosome Location . Start  9699994
Chromosome Location . End  9710268 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A9.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006579 tlk-1 C07A9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07A9.3b C07A9.3b 2898   III: 9699994-9700119

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07A9.3b.1 9699994 9710268 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101378   126   III: 9699994-9700119 Caenorhabditis elegans
Exon101381   105   III: 9704867-9704971 Caenorhabditis elegans
Exon101383   321   III: 9705614-9705934 Caenorhabditis elegans
Exon101387   224   III: 9705985-9706208 Caenorhabditis elegans
Exon101391   481   III: 9706718-9707198 Caenorhabditis elegans
Exon101395   1431   III: 9707258-9708688 Caenorhabditis elegans
Exon101399   111   III: 9708739-9708849 Caenorhabditis elegans
Exon101403   24   III: 9709315-9709338 Caenorhabditis elegans
Exon101408   472   III: 9709797-9710268 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07A9.3b.1 9699994 9710268 1

1 Sequence

Length
3295

1 Sequence Ontology Term

Identifier Name Description
transcript