WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07A9.11.1 Sequence Name  C07A9.11.1
Length (nt)  2199   Chromosome Location  III: 9715885-9720291
Chromosome . Primary Identifier  III Chromosome Location . Start  9715885
Chromosome Location . End  9720291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A9.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003572 ncx-7 C07A9.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07A9.11 C07A9.11 2019   III: 9716056-9716174

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07A9.11.1 9715885 9720291 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101387   290   III: 9715885-9716174 Caenorhabditis elegans
Exon101388   70   III: 9716223-9716292 Caenorhabditis elegans
Exon101389   62   III: 9716339-9716400 Caenorhabditis elegans
Exon101390   238   III: 9716751-9716988 Caenorhabditis elegans
Exon101391   125   III: 9717034-9717158 Caenorhabditis elegans
Exon101393   348   III: 9717486-9717833 Caenorhabditis elegans
Exon101394   186   III: 9717885-9718070 Caenorhabditis elegans
Exon101395   195   III: 9718137-9718331 Caenorhabditis elegans
Exon101396   283   III: 9718389-9718671 Caenorhabditis elegans
Exon101397   132   III: 9718932-9719063 Caenorhabditis elegans
Exon101398   101   III: 9719109-9719209 Caenorhabditis elegans
Exon101399   169   III: 9720123-9720291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07A9.11.1 9715885 9720291 -1

1 Sequence

Length
2199

1 Sequence Ontology Term

Identifier Name Description
transcript