WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05G5.1a Sequence Name  T05G5.1a
Length (nt)  1236   Chromosome Location  III: 9739357-9739487
Chromosome . Primary Identifier  III Chromosome Location . Start  9739357
Chromosome Location . End  9739487
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33540 T05G5.1, isoform a 48.7 411 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00002319
WBRNAi00052555
WBRNAi00018247
WBRNAi00006315
WBRNAi00035223

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05G5.1a 9739357 9739487 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011498 T05G5.1 T05G5.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05G5.1a 9739357 9739487 -1
CDS:T05G5.1a 9739889 9739977 -1
CDS:T05G5.1a 9740422 9740867 -1
CDS:T05G5.1a 9740914 9741042 -1
CDS:T05G5.1a 9742167 9742327 -1
CDS:T05G5.1a 9742945 9743016 -1
CDS:T05G5.1a 9743067 9743170 -1
CDS:T05G5.1a 9743233 9743336 -1

1 Sequence

Length
1236

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05G5.1a.1 T05G5.1a.1 1502   III: 9739094-9743339