WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05G5.10a Sequence Name  T05G5.10a
Length (nt)  588   Chromosome Location  III: 9745908-9745973
Chromosome . Primary Identifier  III Chromosome Location . Start  9745908
Chromosome Location . End  9745973
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37787 IFF-1, isoform a 21.7 195 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00085433
WBRNAi00022626
WBRNAi00035224
WBRNAi00009120
WBRNAi00063093
WBRNAi00063094
WBRNAi00065288
WBRNAi00002589
WBRNAi00002812
WBRNAi00052556
WBRNAi00007828
WBRNAi00063098
WBRNAi00052557
WBRNAi00080813
WBRNAi00063097

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05G5.10a 9745908 9745973 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002064 iff-1 T05G5.10 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05G5.10a 9745908 9745973 -1
CDS:T05G5.10a 9746023 9746160 -1
CDS:T05G5.10a 9746279 9746431 -1
CDS:T05G5.10a 9746476 9746605 -1
CDS:T05G5.10a 9747053 9747153 -1

1 Sequence

Length
588

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05G5.10a.1 T05G5.10a.1 674   III: 9745862-9747193