WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05G5.3 Sequence Name  T05G5.3
Length (nt)  999   Chromosome Location  III: 9747474-9747653
Chromosome . Primary Identifier  III Chromosome Location . Start  9747474
Chromosome Location . End  9747653
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00315 CDK-1 38.3 332 Caenorhabditis elegans
 

Other

64 RNAi

WormBase ID
WBRNAi00110626
WBRNAi00110631
WBRNAi00008004
WBRNAi00035226
WBRNAi00116049
WBRNAi00099940
WBRNAi00100462
WBRNAi00079974
WBRNAi00085348
WBRNAi00009121
WBRNAi00115438
WBRNAi00080525
WBRNAi00052560
WBRNAi00079971
WBRNAi00079972
WBRNAi00079969
WBRNAi00106208
WBRNAi00100836
WBRNAi00101128
WBRNAi00101224
WBRNAi00101243
WBRNAi00101262
WBRNAi00101281
WBRNAi00101317
WBRNAi00101319
WBRNAi00101318
WBRNAi00101321
WBRNAi00101320
WBRNAi00101323
WBRNAi00101322

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05G5.3 9747474 9747653 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000405 cdk-1 T05G5.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05G5.3 9747474 9747653 1
CDS:T05G5.3 9747704 9747910 1
CDS:T05G5.3 9747959 9748114 1
CDS:T05G5.3 9748166 9748492 1
CDS:T05G5.3 9748540 9748668 1

1 Sequence

Length
999

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05G5.3.1 T05G5.3.1 1185   III: 9747472-9748852