WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05G5.9a Sequence Name  T05G5.9a
Length (nt)  1983   Chromosome Location  III: 9757794-9757864
Chromosome . Primary Identifier  III Chromosome Location . Start  9757794
Chromosome Location . End  9757864
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34088 GCC-2, isoform a 75.0 660 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052571
WBRNAi00018249
WBRNAi00018250
WBRNAi00006084

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05G5.9a 9757794 9757864 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011503 gcc-2 T05G5.9 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05G5.9a 9757794 9757864 -1
CDS:T05G5.9a 9758349 9758565 -1
CDS:T05G5.9a 9758609 9758745 -1
CDS:T05G5.9a 9758813 9758864 -1
CDS:T05G5.9a 9760385 9761056 -1
CDS:T05G5.9a 9761098 9761209 -1
CDS:T05G5.9a 9761257 9761708 -1
CDS:T05G5.9a 9761755 9761853 -1
CDS:T05G5.9a 9761913 9762014 -1
CDS:T05G5.9a 9762074 9762142 -1

1 Sequence

Length
1983

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05G5.9a.1 T05G5.9a.1 2162   III: 9757616-9762143