WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R10E11.3a Sequence Name  R10E11.3a
Length (nt)  1281   Chromosome Location  III: 9776638-9776730
Chromosome . Primary Identifier  III Chromosome Location . Start  9776638
Chromosome Location . End  9776730
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E11.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41150 USP-46, isoform a 48.3 426 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00094703
WBRNAi00051695
WBRNAi00017699
WBRNAi00076611
WBRNAi00006042
WBRNAi00073237
WBRNAi00034816
WBRNAi00060829
WBRNAi00060827
WBRNAi00060828
WBRNAi00060830
WBRNAi00060831
WBRNAi00060832
WBRNAi00060833
WBRNAi00060834
WBRNAi00060835

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R10E11.3a 9776638 9776730 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011216 usp-46 R10E11.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:R10E11.3a 9776638 9776730 1
CDS:R10E11.3a 9776779 9776881 1
CDS:R10E11.3a 9776940 9777062 1
CDS:R10E11.3a 9777122 9777564 1
CDS:R10E11.3a 9777810 9777989 1
CDS:R10E11.3a 9778278 9778616 1

1 Sequence

Length
1281

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R10E11.3a.1 R10E11.3a.1 1530   III: 9776623-9778850