WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK757.3a.1 Sequence Name  ZK757.3a.1
Length (nt)  3258   Chromosome Location  III: 9887210-9891424
Chromosome . Primary Identifier  III Chromosome Location . Start  9887210
Chromosome Location . End  9891424 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK757.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006449 alg-4 ZK757.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK757.3a ZK757.3a 3123   III: 9887301-9887392

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK757.3a.1 9887210 9891424 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101909   183   III: 9887210-9887392 Caenorhabditis elegans
Exon101911   125   III: 9887439-9887563 Caenorhabditis elegans
Exon101914   498   III: 9887611-9888108 Caenorhabditis elegans
Exon101917   125   III: 9888156-9888280 Caenorhabditis elegans
Exon101920   263   III: 9888326-9888588 Caenorhabditis elegans
Exon101923   508   III: 9888638-9889145 Caenorhabditis elegans
Exon101926   217   III: 9889195-9889411 Caenorhabditis elegans
Exon101929   894   III: 9889456-9890349 Caenorhabditis elegans
Exon101932   173   III: 9890398-9890570 Caenorhabditis elegans
Exon101936   173   III: 9890617-9890789 Caenorhabditis elegans
Exon101940   80   III: 9891277-9891356 Caenorhabditis elegans
Exon101945   19   III: 9891406-9891424 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK757.3a.1 9887210 9891424 -1

1 Sequence

Length
3258

1 Sequence Ontology Term

Identifier Name Description
transcript