WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK757.3b.1 Sequence Name  ZK757.3b.1
Length (nt)  3222   Chromosome Location  III: 9887218-9891356
Chromosome . Primary Identifier  III Chromosome Location . Start  9887218
Chromosome Location . End  9891356 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK757.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006449 alg-4 ZK757.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK757.3b ZK757.3b 3114   III: 9887301-9887392

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK757.3b.1 9887218 9891356 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101910   175   III: 9887218-9887392 Caenorhabditis elegans
Exon101913   125   III: 9887439-9887563 Caenorhabditis elegans
Exon101916   498   III: 9887611-9888108 Caenorhabditis elegans
Exon101919   125   III: 9888156-9888280 Caenorhabditis elegans
Exon101922   263   III: 9888326-9888588 Caenorhabditis elegans
Exon101925   508   III: 9888638-9889145 Caenorhabditis elegans
Exon101928   217   III: 9889195-9889411 Caenorhabditis elegans
Exon101931   894   III: 9889456-9890349 Caenorhabditis elegans
Exon101934   173   III: 9890398-9890570 Caenorhabditis elegans
Exon101935   164   III: 9890617-9890780 Caenorhabditis elegans
Exon101941   80   III: 9891277-9891356 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK757.3b.1 9887218 9891356 -1

1 Sequence

Length
3222

1 Sequence Ontology Term

Identifier Name Description
transcript