WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK757.3b.1 Sequence Name  ZK757.3b.1
Length (nt)  3222   Chromosome Location  III: 9887218-9891356
Chromosome . Primary Identifier  III Chromosome Location . Start  9887218
Chromosome Location . End  9891356 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK757.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006449 alg-4 ZK757.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK757.3b ZK757.3b 3114   III: 9887301-9887392

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK757.3b.1 9887218 9891356 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101943   175   III: 9887218-9887392 Caenorhabditis elegans
Exon101946   125   III: 9887439-9887563 Caenorhabditis elegans
Exon101949   498   III: 9887611-9888108 Caenorhabditis elegans
Exon101952   125   III: 9888156-9888280 Caenorhabditis elegans
Exon101955   263   III: 9888326-9888588 Caenorhabditis elegans
Exon101958   508   III: 9888638-9889145 Caenorhabditis elegans
Exon101961   217   III: 9889195-9889411 Caenorhabditis elegans
Exon101964   894   III: 9889456-9890349 Caenorhabditis elegans
Exon101967   173   III: 9890398-9890570 Caenorhabditis elegans
Exon101968   164   III: 9890617-9890780 Caenorhabditis elegans
Exon101974   80   III: 9891277-9891356 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK757.3b.1 9887218 9891356 -1

1 Sequence

Length
3222

1 Sequence Ontology Term

Identifier Name Description
transcript