WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F12.4.1 Sequence Name  F40F12.4.1
Length (nt)  1680   Chromosome Location  III: 9893155-9898426
Chromosome . Primary Identifier  III Chromosome Location . Start  9893155
Chromosome Location . End  9898426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009593 mam-7 F40F12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F12.4 F40F12.4 1680   III: 9893155-9893215

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40F12.4.1 9893155 9898426 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101946   61   III: 9893155-9893215 Caenorhabditis elegans
Exon101947   72   III: 9893265-9893336 Caenorhabditis elegans
Exon101948   138   III: 9894776-9894913 Caenorhabditis elegans
Exon101949   186   III: 9894963-9895148 Caenorhabditis elegans
Exon101950   112   III: 9895220-9895331 Caenorhabditis elegans
Exon101951   81   III: 9895423-9895503 Caenorhabditis elegans
Exon101952   205   III: 9895549-9895753 Caenorhabditis elegans
Exon101953   231   III: 9896092-9896322 Caenorhabditis elegans
Exon101954   241   III: 9896406-9896646 Caenorhabditis elegans
Exon101956   104   III: 9897190-9897293 Caenorhabditis elegans
Exon101957   144   III: 9897349-9897492 Caenorhabditis elegans
Exon101958   105   III: 9898322-9898426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40F12.4.1 9893155 9898426 1

1 Sequence

Length
1680

1 Sequence Ontology Term

Identifier Name Description
transcript