WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F40F12.5a Sequence Name  F40F12.5a
Length (nt)  3435   Chromosome Location  III: 9898998-9899147
Chromosome . Primary Identifier  III Chromosome Location . Start  9898998
Chromosome Location . End  9899147
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F12.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36647 CYLD-1, isoform a 128.2 1144 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00046860
WBRNAi00046861
WBRNAi00014653
WBRNAi00014654
WBRNAi00006396
WBRNAi00006406
WBRNAi00032028
WBRNAi00112453
WBRNAi00094870
WBRNAi00114323

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F40F12.5a 9898998 9899147 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009594 cyld-1 F40F12.5 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F40F12.5a 9898998 9899147 -1
CDS:F40F12.5a 9899310 9899970 -1
CDS:F40F12.5a 9900043 9900291 -1
CDS:F40F12.5a 9900339 9900819 -1
CDS:F40F12.5a 9900893 9901301 -1
CDS:F40F12.5a 9901590 9901725 -1
CDS:F40F12.5a 9901776 9901924 -1
CDS:F40F12.5a 9902567 9902726 -1
CDS:F40F12.5a 9902771 9902873 -1
CDS:F40F12.5a 9903819 9903903 -1
CDS:F40F12.5a 9906948 9907052 -1
CDS:F40F12.5a 9909088 9909196 -1
CDS:F40F12.5a 9909240 9909316 -1
CDS:F40F12.5a 9909597 9909722 -1
CDS:F40F12.5a 9910116 9910355 -1
CDS:F40F12.5a 9910411 9910568 -1
CDS:F40F12.5a 9910621 9910657 -1

1 Sequence

Length
3435

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F40F12.5a.1 F40F12.5a.1 3830   III: 9898604-9910658