WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F12.7.3 Sequence Name  F40F12.7.3
Length (nt)  2412   Chromosome Location  III: 9914261-9916949
Chromosome . Primary Identifier  III Chromosome Location . Start  9914261
Chromosome Location . End  9916949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F12.7.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009595 cbp-3 F40F12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F12.7 F40F12.7 600   III: 9914631-9914726

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40F12.7.3 9914261 9916949 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102005   466   III: 9914261-9914726 Caenorhabditis elegans
Exon102009   127   III: 9914779-9914905 Caenorhabditis elegans
Exon102012   117   III: 9915037-9915153 Caenorhabditis elegans
Exon102015   121   III: 9915204-9915324 Caenorhabditis elegans
Exon102018   1581   III: 9915369-9916949 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40F12.7.3 9914261 9916949 1

1 Sequence

Length
2412

1 Sequence Ontology Term

Identifier Name Description
transcript