WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K03H1.5.1 Sequence Name  K03H1.5.1
Length (nt)  4331   Chromosome Location  III: 9932398-9939704
Chromosome . Primary Identifier  III Chromosome Location . Start  9932398
Chromosome Location . End  9939704 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03H1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010540 dec-7 K03H1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03H1.5 K03H1.5 4158   III: 9932416-9932547

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K03H1.5.1 9932398 9939704 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102060   150   III: 9932398-9932547 Caenorhabditis elegans
Exon102061   435   III: 9932895-9933329 Caenorhabditis elegans
Exon102062   102   III: 9933508-9933609 Caenorhabditis elegans
Exon102063   288   III: 9933749-9934036 Caenorhabditis elegans
Exon102065   63   III: 9934242-9934304 Caenorhabditis elegans
Exon102066   104   III: 9934370-9934473 Caenorhabditis elegans
Exon102067   355   III: 9934521-9934875 Caenorhabditis elegans
Exon102069   221   III: 9935413-9935633 Caenorhabditis elegans
Exon102070   214   III: 9935676-9935889 Caenorhabditis elegans
Exon102071   569   III: 9935936-9936504 Caenorhabditis elegans
Exon102072   227   III: 9937019-9937245 Caenorhabditis elegans
Exon102073   180   III: 9937298-9937477 Caenorhabditis elegans
Exon102074   348   III: 9937568-9937915 Caenorhabditis elegans
Exon102075   294   III: 9937994-9938287 Caenorhabditis elegans
Exon102076   367   III: 9938874-9939240 Caenorhabditis elegans
Exon102077   414   III: 9939291-9939704 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K03H1.5.1 9932398 9939704 1

1 Sequence

Length
4331

1 Sequence Ontology Term

Identifier Name Description
transcript