WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05B5.1.1 Sequence Name  C05B5.1.1
Length (nt)  512   Chromosome Location  III: 9987725-9988452
Chromosome . Primary Identifier  III Chromosome Location . Start  9987725
Chromosome Location . End  9988452 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05B5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007319 C05B5.1 C05B5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05B5.1 C05B5.1 438   III: 9987768-9987931

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05B5.1.1 9987725 9988452 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102181   207   III: 9987725-9987931 Caenorhabditis elegans
Exon102182   78   III: 9987979-9988056 Caenorhabditis elegans
Exon102183   142   III: 9988134-9988275 Caenorhabditis elegans
Exon102184   85   III: 9988368-9988452 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05B5.1.1 9987725 9988452 -1

1 Sequence

Length
512

1 Sequence Ontology Term

Identifier Name Description
transcript