WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05B5.17.1 Sequence Name  C05B5.17.1
Length (nt)  564   Chromosome Location  III: 9998542-9999335
Chromosome . Primary Identifier  III Chromosome Location . Start  9998542
Chromosome Location . End  9999335 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05B5.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00219314 C05B5.17 C05B5.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05B5.17 C05B5.17 564   III: 9998542-9998747

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05B5.17.1 9998542 9999335 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102197   206   III: 9998542-9998747 Caenorhabditis elegans
Exon102198   99   III: 9998928-9999026 Caenorhabditis elegans
Exon102199   259   III: 9999077-9999335 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05B5.17.1 9998542 9999335 -1

1 Sequence

Length
564

1 Sequence Ontology Term

Identifier Name Description
transcript