WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05B5.8.1 Sequence Name  C05B5.8.1
Length (nt)  614   Chromosome Location  III: 10005459-10006784
Chromosome . Primary Identifier  III Chromosome Location . Start  10005459
Chromosome Location . End  10006784 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05B5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007324 glam-1 C05B5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05B5.8 C05B5.8 534   III: 10005531-10005622

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05B5.8.1 10005459 10006784 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102223   164   III: 10005459-10005622 Caenorhabditis elegans
Exon102224   211   III: 10005680-10005890 Caenorhabditis elegans
Exon102225   239   III: 10006546-10006784 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05B5.8.1 10005459 10006784 -1

1 Sequence

Length
614

1 Sequence Ontology Term

Identifier Name Description
transcript