WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05B5.6.1 Sequence Name  C05B5.6.1
Length (nt)  1274   Chromosome Location  III: 10007966-10010217
Chromosome . Primary Identifier  III Chromosome Location . Start  10007966
Chromosome Location . End  10010217 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05B5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007323 fbxa-155 C05B5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05B5.6 C05B5.6 1227   III: 10007973-10008206

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05B5.6.1 10007966 10010217 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102226   241   III: 10007966-10008206 Caenorhabditis elegans
Exon102227   646   III: 10008252-10008897 Caenorhabditis elegans
Exon102228   87   III: 10009361-10009447 Caenorhabditis elegans
Exon102229   207   III: 10009494-10009700 Caenorhabditis elegans
Exon102230   93   III: 10010125-10010217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05B5.6.1 10007966 10010217 -1

1 Sequence

Length
1274

1 Sequence Ontology Term

Identifier Name Description
transcript