WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16G12.3.4 Sequence Name  T16G12.3.4
Length (nt)  1527   Chromosome Location  III: 10052039-10054368
Chromosome . Primary Identifier  III Chromosome Location . Start  10052039
Chromosome Location . End  10054368 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16G12.3.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011804 T16G12.3 T16G12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16G12.3 T16G12.3 582   III: 10052067-10052144

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16G12.3.4 10052039 10054368 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102311   106   III: 10052039-10052144 Caenorhabditis elegans
Exon102319   105   III: 10052254-10052358 Caenorhabditis elegans
Exon102324   206   III: 10052471-10052676 Caenorhabditis elegans
Exon102329   154   III: 10052835-10052988 Caenorhabditis elegans
Exon102332   826   III: 10053037-10053862 Caenorhabditis elegans
Exon102338   130   III: 10054239-10054368 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16G12.3.4 10052039 10054368 1

1 Sequence

Length
1527

1 Sequence Ontology Term

Identifier Name Description
transcript