WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T16H12.11 Sequence Name  T16H12.11
Length (nt)  927   Chromosome Location  III: 10087406-10087566
Chromosome . Primary Identifier  III Chromosome Location . Start  10087406
Chromosome Location . End  10087566
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16H12.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48020 HAL-2 36.1 308 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00053436
WBRNAi00002630

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T16H12.11 10087406 10087566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011819 hal-2 T16H12.11 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T16H12.11 10087406 10087566 -1
CDS:T16H12.11 10087619 10087804 -1
CDS:T16H12.11 10087854 10087960 -1
CDS:T16H12.11 10088010 10088286 -1
CDS:T16H12.11 10088337 10088435 -1
CDS:T16H12.11 10088489 10088585 -1

1 Sequence

Length
927

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T16H12.11.2 T16H12.11.2 1233   III: 10087188-10088673
Transcript:T16H12.11.1 T16H12.11.1 1336   III: 10087188-10088931