WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16H12.4.1 Sequence Name  T16H12.4.1
Length (nt)  1234   Chromosome Location  III: 10088757-10090785
Chromosome . Primary Identifier  III Chromosome Location . Start  10088757
Chromosome Location . End  10090785 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16H12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011814 gtf-2H2C T16H12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16H12.4 T16H12.4 1131   III: 10088854-10088983

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16H12.4.1 10088757 10090785 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102491   227   III: 10088757-10088983 Caenorhabditis elegans
Exon102492   186   III: 10089032-10089217 Caenorhabditis elegans
Exon102493   154   III: 10089269-10089422 Caenorhabditis elegans
Exon102494   88   III: 10089476-10089563 Caenorhabditis elegans
Exon102495   91   III: 10089612-10089702 Caenorhabditis elegans
Exon102496   106   III: 10089747-10089852 Caenorhabditis elegans
Exon102497   106   III: 10089902-10090007 Caenorhabditis elegans
Exon102498   87   III: 10090051-10090137 Caenorhabditis elegans
Exon102499   131   III: 10090192-10090322 Caenorhabditis elegans
Exon102500   58   III: 10090728-10090785 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16H12.4.1 10088757 10090785 -1

1 Sequence

Length
1234

1 Sequence Ontology Term

Identifier Name Description
transcript