WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1128.2a.1 Sequence Name  ZK1128.2a.1
Length (nt)  1609   Chromosome Location  III: 10115036-10116866
Chromosome . Primary Identifier  III Chromosome Location . Start  10115036
Chromosome Location . End  10116866 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1128.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014228 mett-10 ZK1128.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1128.2a ZK1128.2a 1440   III: 10115043-10115243

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1128.2a.1 10115036 10116866 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102532   208   III: 10115036-10115243 Caenorhabditis elegans
Exon102535   300   III: 10115314-10115613 Caenorhabditis elegans
Exon102537   266   III: 10115668-10115933 Caenorhabditis elegans
Exon102539   169   III: 10115984-10116152 Caenorhabditis elegans
Exon102542   666   III: 10116201-10116866 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1128.2a.1 10115036 10116866 1

1 Sequence

Length
1609

1 Sequence Ontology Term

Identifier Name Description
transcript