WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1128.6a.1 Sequence Name  ZK1128.6a.1
Length (nt)  1987   Chromosome Location  III: 10124183-10132404
Chromosome . Primary Identifier  III Chromosome Location . Start  10124183
Chromosome Location . End  10132404 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1128.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014232 ttll-4 ZK1128.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1128.6a ZK1128.6a 1806   III: 10124183-10124285

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1128.6a.1 10124183 10132404 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102563   103   III: 10124183-10124285 Caenorhabditis elegans
Exon102567   284   III: 10127794-10128077 Caenorhabditis elegans
Exon102569   102   III: 10128464-10128565 Caenorhabditis elegans
Exon102573   276   III: 10129310-10129585 Caenorhabditis elegans
Exon102577   83   III: 10129640-10129722 Caenorhabditis elegans
Exon102581   129   III: 10129795-10129923 Caenorhabditis elegans
Exon102585   57   III: 10129982-10130038 Caenorhabditis elegans
Exon102589   378   III: 10130741-10131118 Caenorhabditis elegans
Exon102593   249   III: 10131785-10132033 Caenorhabditis elegans
Exon102598   326   III: 10132079-10132404 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1128.6a.1 10124183 10132404 1

1 Sequence

Length
1987

1 Sequence Ontology Term

Identifier Name Description
transcript