WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00197208 Gene Name  ZK1128.9
Sequence Name  ? ZK1128.9 Organism  Caenorhabditis elegans
Automated Description  Is affected by ilc-17.1 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 131
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00197208

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1128.9 ZK1128.9 131   III: 10136781-10136911
 

Other

0 CDSs

0 RNAi Result

6 Allele

Public Name
gk964518
gk962701
gk963887
gk963759
gk963760
gk183474

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00197208 10136781 10136911 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIII_10133237..10136780   3544 III: 10133237-10136780 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage. DESeq2, fold change > 2, FDR < 0.05. WBPaper00066594:ilc-17.1(syb5296)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00197208 10136781 10136911 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
131

1 Sequence Ontology Term