WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E5.3b.1 Sequence Name  K08E5.3b.1
Length (nt)  10213   Chromosome Location  III: 10167675-10183529
Chromosome . Primary Identifier  III Chromosome Location . Start  10167675
Chromosome Location . End  10183529 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E5.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003482 mua-3 K08E5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E5.3b K08E5.3b 9552   III: 10168067-10168124

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08E5.3b.1 10167675 10183529 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102661   450   III: 10167675-10168124 Caenorhabditis elegans
Exon102662   30   III: 10168174-10168203 Caenorhabditis elegans
Exon102665   153   III: 10170115-10170267 Caenorhabditis elegans
Exon102668   88   III: 10171361-10171448 Caenorhabditis elegans
Exon102670   62   III: 10171923-10171984 Caenorhabditis elegans
Exon102672   291   III: 10172925-10173215 Caenorhabditis elegans
Exon102674   212   III: 10173272-10173483 Caenorhabditis elegans
Exon102676   104   III: 10173533-10173636 Caenorhabditis elegans
Exon102678   461   III: 10173682-10174142 Caenorhabditis elegans
Exon102680   147   III: 10174443-10174589 Caenorhabditis elegans
Exon102682   70   III: 10174637-10174706 Caenorhabditis elegans
Exon102684   1100   III: 10174755-10175854 Caenorhabditis elegans
Exon102686   294   III: 10175907-10176200 Caenorhabditis elegans
Exon102688   181   III: 10176258-10176438 Caenorhabditis elegans
Exon102690   266   III: 10176482-10176747 Caenorhabditis elegans
Exon102692   315   III: 10176794-10177108 Caenorhabditis elegans
Exon102694   303   III: 10177161-10177463 Caenorhabditis elegans
Exon102696   1041   III: 10177527-10178567 Caenorhabditis elegans
Exon102698   441   III: 10178629-10179069 Caenorhabditis elegans
Exon102700   777   III: 10179120-10179896 Caenorhabditis elegans
Exon102702   593   III: 10179952-10180544 Caenorhabditis elegans
Exon102704   2100   III: 10180598-10182697 Caenorhabditis elegans
Exon102706   197   III: 10182747-10182943 Caenorhabditis elegans
Exon102708   537   III: 10182993-10183529 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08E5.3b.1 10167675 10183529 1

1 Sequence

Length
10213

1 Sequence Ontology Term

Identifier Name Description
transcript