WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20G5.6.1 Sequence Name  T20G5.6.1
Length (nt)  1570   Chromosome Location  III: 10183762-10186260
Chromosome . Primary Identifier  III Chromosome Location . Start  10183762
Chromosome Location . End  10186260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20G5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006783 unc-47 T20G5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20G5.6 T20G5.6 1461   III: 10183871-10183973

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20G5.6.1 10183762 10186260 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102709   212   III: 10183762-10183973 Caenorhabditis elegans
Exon102710   79   III: 10184025-10184103 Caenorhabditis elegans
Exon102711   527   III: 10184214-10184740 Caenorhabditis elegans
Exon102712   154   III: 10184953-10185106 Caenorhabditis elegans
Exon102713   253   III: 10185205-10185457 Caenorhabditis elegans
Exon102714   212   III: 10185598-10185809 Caenorhabditis elegans
Exon102715   133   III: 10186128-10186260 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20G5.6.1 10183762 10186260 -1

1 Sequence

Length
1570

1 Sequence Ontology Term

Identifier Name Description
transcript