WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20G5.12.1 Sequence Name  T20G5.12.1
Length (nt)  737   Chromosome Location  III: 10201604-10202595
Chromosome . Primary Identifier  III Chromosome Location . Start  10201604
Chromosome Location . End  10202595 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20G5.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011873 T20G5.12 T20G5.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20G5.12 T20G5.12 651   III: 10201623-10201862

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20G5.12.1 10201604 10202595 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102741   259   III: 10201604-10201862 Caenorhabditis elegans
Exon102743   96   III: 10201951-10202046 Caenorhabditis elegans
Exon102744   93   III: 10202103-10202195 Caenorhabditis elegans
Exon102745   119   III: 10202242-10202360 Caenorhabditis elegans
Exon102746   170   III: 10202426-10202595 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20G5.12.1 10201604 10202595 1

1 Sequence

Length
737

1 Sequence Ontology Term

Identifier Name Description
transcript