WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20G5.4b.1 Sequence Name  T20G5.4b.1
Length (nt)  508   Chromosome Location  III: 10213967-10214828
Chromosome . Primary Identifier  III Chromosome Location . Start  10213967
Chromosome Location . End  10214828 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20G5.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011868 best-18 T20G5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20G5.4b T20G5.4b 426   III: 10213967-10214118

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20G5.4b.1 10213967 10214828 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102770   152   III: 10213967-10214118 Caenorhabditis elegans
Exon102772   90   III: 10214168-10214257 Caenorhabditis elegans
Exon102773   266   III: 10214563-10214828 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20G5.4b.1 10213967 10214828 1

1 Sequence

Length
508

1 Sequence Ontology Term

Identifier Name Description
transcript